Intra- and interbreed genetic variations of mitochondrial DNA major non-coding regions in Japanese native dog breeds [Canis familiaris)

Mitochondrial DNA (mtDNA) major non-coding regions were amplified from 73 dogs of eight Japanese native dog breeds and from 21 dogs of 16 non-Japanese dog breeds by the polymerase chain reaction and their DNA sequences were determined. A total of 51 nucleotide positions within the non-coding region (969–972 base pairs) showed nucleotide variations of which 48 were caused by transition. These nucleotide substitutions were abundant in the region proximate to tRNA^Pro. In addition to the nucleotide substitutions, the dog mtDNA D-loop sequences had a heteroplasmic repetitive sequence (TACACGTÀCG) involving size variation. The DNA sequences of the non-coding region were classified into four different groups by phylogenetic analysis and the deepest branchpoints of this dog phylogeny was calculated to about 100 000 years before the present. Phylogenetic analysis showed that Japanese native dog breeds could not be clearly delimited as distinct breeds. Many haplotypes found in members of some clustering groups were seen in each dog breed, and interbreed nucleotide differences between Japanese dog breeds were almost the same as the intrabreed nucleotide diversities.     

Gender differences in anaerobic power tests

The purpose of this study was to determine if the differences in anaerobic power between males and females could be accounted for by differences in body composition, strength, and neuromuscular function. A total of 82 untrained men and 99 women took part in the study. Body composition, somatotype, isometric strength, neuromuscular function were measured, and four anaerobic power tests performed. The men were significantly different from the women on all strength, power, and neuromuscular measurements except reaction time and on all anthropometric and somatotype dimensions except ectomorphy. Strength and anthropometric dimensions were similarly related to anaerobic power values within each sex. Relative fat (%fat) exerted different degrees of influence on sprint and jump performances in each sex. Removing the influence of anthropometric, strength, and neuromuscular differences by analysis of covariance reduced, but did not remove, the significant differences between the sexes. Therefore, factors other than lean body mass, leg strength, and neuromuscular function may be operating in short-term, explosive power performances to account for the differences between the sexes. The task-specific nature of anaerobic power tests and the relatively large influence of anthropometric factors on power production were confirmed.     

ESTIMATING NATURAL MORTALITY RATE IN REPRODUCTIVELY ACTIVE FEMALE SOUTHERN RIGHT WHALES, EUBALAENA AUSTRALIS

Cow-calf pairs of southern right whales on the South African coast have been photographed in aerial surveys in October each year since 1979. In this paper 469 resightings of 177 individually identified cows photographed in the first six years of surveys have been analyzed in two ways to produce estimates of natural mortality rate. Both methods assume that all females calve either two, three, or four years after their previous calf. In Method A there is assumed to be no systematic trend with time in the probability of a female being photographed on each calving occasion. Natural logarithms of the numbers photographed 2-4, 5-7, 8-10, etc. yr after being first seen are regressed against time, the slope of which provides an estimate of natural mortality rate of 0.0255 ± 0.0071. The intercept value for this regression provides an estimate of the detection probability, or 0.769 ± 0.011. In Method B it is assumed that if a female has not been photographed for at least nine years then it is dead. Annual mortality estimates are obtained from the proportional reduction in the numbers of females known to be alive at each three-year interval after being first photographed, up to at least 6-8 yr from the present. Method B produces an estimate of natural mortality of 0.0260 ± 0.0190 (corrected to 0.0227 ± 0.0192 using the average detection probability). Both methods may be subject to various biases that tend to inflate estimates of natural mortality.     

Structural Insight into Chromatin Recognition by Multiple Domains of the Tumor Suppressor RBBP1

Retinoblastoma-binding protein 1 (RBBP1) is involved in gene regulation, epigenetic regulation, and disease processes. RBBP1 contains five domains with DNA-binding or histone-binding activities, but how RBBP1 specifically recognizes chromatin is still unknown. An AT-rich interaction domain (ARID) in RBBP1 was proposed to be the key region for DNA-binding and gene suppression. Here, we first determined the solution structure of a tandem PWWP-ARID domain mutant of RBBP1 after deletion of a long flexible acidic loop L12 in the ARID domain. NMR titration results indicated that the ARID domain interacts with DNA with no GC- or AT-rich preference. Surprisingly, we found that the loop L12 binds to the DNA-binding region of the ARID domain as a DNA mimic and inhibits DNA binding. The loop L12 can also bind weakly to the Tudor and chromobarrel domains of RBBP1, but binds more strongly to the DNA-binding region of the histone H2A-H2B heterodimer. Furthermore, both the loop L12 and DNA can enhance the binding of the chromobarrel domain to H3K4me3 and H4K20me3. Based on these results, we propose a model of chromatin recognition by RBBP1, which highlights the unexpected multiple key roles of the disordered acidic loop L12 in the specific binding of RBBP1 to chromatin.     

Association of glycosylated haemoglobin HbA1c levels with outcome in patients with COVID-19: A Retrospective Study

Patients with hyperglycemia tend to be susceptible to Coronavirus disease 2019 (COVID-19). However, the association of HbA1c level with outcome of COVID-19 patients was unclear. We performed a retrospective study of 2880 cases of COVID-19 admitted in Tongji Hospital, Wuhan, China, among which 922 had detected the HbA1c levels. We found that COVID-19 patients with either lower levels of HbAlc (3%-4.9%) or higher levels of HbAlc (≥6%) were associated with elevated all-cause mortality. Meanwhile, we observed that HbAlc levels were highly correlated with haemoglobin (Hb) and total cholesterol (TC) (P < .0001), moderately correlated with albumin (ALB) and high-sensitive C reaction protein (hs-CRP) (0.0001 < P<.001), and relatively low correlated with low-density lipoprotein cholesterol (LDL-C) (.001 < P<.01). These associated cofactors might together contribute to the clinical outcome of COVID-19 patients. Furthermore, the mortality was higher in COVID-19 patients with newly diagnosed diabetes mellitus (DM) compared with COVID-19 patients with history of DM. Moreover, in patients with history of DM, the mortality was decreased in patients treated with anti-hyperglycaemic drugs. In summary, our data showed that the in-hospital mortality was increased in COVID-19 patients with lower or higher levels of HbAlc. Meanwhile, initiation of appropriate anti-hyperglycaemic treatment might improve the clinical outcome in COVID-19 patients.     

Three-dimensional model on thermal response of skin subject to laser heating

A three-dimensional (3D) multilayer model based on the skin physical structure is developed to investigate the transient thermal response of human skin subject to laser heating. The temperature distribution of the skin is modeled by the bioheat transfer equation, and the influence of laser heating is expressed as a source term where the strength of the source is a product of a Gaussian shaped incident irradiance, an exponentially shaped axial attenuation, and a time function. The water evaporation and diffusion is included in the model by adding two terms regarding the heat loss due to the evaporation and diffusion, where the rate of water evaporation is determined based on the theory of laminar boundary layer. Cryogen spray cooling (CSC) in laser therapy is studied, as well as its effect on the skin thermal response. The time-dependent equation is discretized using the finite difference method with the Crank–Nicholson scheme and the stability of the numerical method is analyzed. The large sparse linear system resulted from discretizing the governing partial differential equation is solved by a GMRES solver and the expected simulation results are obtained.     

The past, present and future of childhood malaria mortality in Africa

During the past few years, there has been a historic series of declarations of renewed commitment to malaria control in Africa. Whether the burden of malaria is increasing in Africa is a moot point. This article attempts to re-construct the evidence for the trends in childhood mortality as a result of Plasmodium falciparum infection over the last century in Africa.     

POPULATION ECOLOGY OF SEALS: RETROSPECTIVE and PROSPECTIVE VIEWS

This review focuses on population ecology, with critical accounts of past work and future possibilities in age determination, body growth and condition, estimating abundances, mortality rates and lifespans, reproduction, comparative life histories, population dynamics, population modelling and seals in ecosystems. We suggest ways to reduce errors in age determination and to improve methods of obtaining and presenting growth data. Generalized von Bertalanffy growth equations are promoted as a basis for analysing species differences and intra-population variation in body lengths. Indices other than blubber thickness may be better for following body condition. Catch-effort and survival-index methods of estimating abundances have limited applicability, total counts are only locally useful, and sample counts may only be accurate for scattered, ice-breeding species. Some new techniques for population indices are promising. Pre-adult mortality remains difficult to assess. Although not always recognized, adult mortality rates do increase with age, as well described by Gompertz functions. Existing estimates of lifespans are unreliable, and a new approach is outlined. There are methodological problems in estimating ages of maturity. Corpora albicantia should not be used for back-extrapolation, and more study is needed of use of teeth annuli as indicators of maturity. Age-specific proportions of females parous based on reproductive tracts may disagree with proportions recruited in breeding groups, suggesting that the former may often be in error. Allometric relationships among body sizes and life-history variables need more reliable data, especially since the residuals of such relationships are of greatest interest. Brain size may be a better scalar. Direct evidence of density dependence in population growth of seals is sparse. Early survival has been more widely shown to be density-dependent, but only among polygynous species where crowding on land may be a byproduct of sexual selection; there is as yet no good evidence of trophic restraints. Evidence of density dependence of ages of maturity is generally unconvincing. Predation, especially by sharks, may be critical in some species. Characteristics of equilibrium populations might profitably be sought in mass remains in middens and historic kill sites. More attention should be paid to the search for density-independent influences. Supposed impacts of fisheries and pollutions are not wholly convincing. Natural epidemics may keep some populations below resource or space saturation, and some high-latitude species may show large year-to-year variations in recruitment and abundances. Evidence for such density-independent effects should be sought in residuals of growth curves and in teeth layers. Although surplus yield and production/biomass models have been tried, realistic pinniped models must be completely age-structured and time-dependent. Simple models have questionably assumed stationarity to derive life-history parameters. The best available estimates of density dependence of such parameters give no resolution when extrapolated toward equilibrium, and only limited efforts have been made to introduce stochasticity. Better data, not improved model structures, are needed for better understanding. Recent work has contradicted the assumed voraciousness of seals, but their system impacts and dependencies are not well understood. Extended Lotka-Volterra equations used to model Antarctic food webs, including seals, are merely heuristic. Fixed seal biomasses enter as top-down, driving functions in a Bering Sea model, which accordingly cannot be used to analyse or manage their populations. Some Soviet models are tantalizing but ill-specified. The introduction of harbor seals in well-chosen lakes might give mote insights into system roles than would more elaborate modelling. We wonder if pinniped ecology is well served by too many enthusiasts operating under too many restraints.     

Phenotypic variability in nesting success among Osmia lignaria propinqua females in a glasshouse environment: (Hymenoptera: Megachilidae)

Abstract. 1. The phenotypic variability of several estimates of fitness among seventeen nesting female O.lignaria Cresson was examined in a glasshouse provided with abundant resources.
2. Females exhibited wide variation in: (a) number of nests and cells made and in their rate of construction, (b) the incidence of mortality of offspring, and (c) the percentage of male offspring produced (52–100%).
3. In confirmation of earlier field studies: (a) more offspring of both sexes were produced during the first half of the nesting season, (b) most female offspring were produced early in the nesting season, (c) most parental investment during the last half of the flight season was made in male offspring, (d) there was a decrease in offspring size with season, with females decreasing more than males, and (e) the ratio of female/male body weight was = 1.8. These results appear to be due to ageing rather than to a reduction in resource availability.
4. No relation between female size and fecundity was evident.
5. There was no evidence that small females tended to produce a greater proportion of the smaller sex (males) than did large females.
6. Smaller offspring of both sexes had a much greater probability of dying overwinter than did large offspring. However, where the sexes overlapped in size (large males, small females), almost all females died and almost all males survived. We hypothesize that as size of offspring produced declines with season, a greater proportion of males are produced because they have a much greater probability of surviving at small body sizes.